Vendors & Formats

Even though a vendor is supported, it’s possible that some of its detectors, detector modes or versions aren’t fully supported. If you have problems, raise a ticket. Please attach the problematic file or send it to support@elsci.io if you wish it to be kept private.

Vendor format* Files inside** Notes

Waters MassLynx (.raw)

.dat

Agilent Chemstation (.d)

.ms, .uv

Agilent OpenLab (.sirslt)

.dx, .rx

Agilent MassHunter (.d)

AcqData folder

Shimadzu LabSolutions (.lcd)

Already a file

For manual upload still needs to be ZIPed

Bruker HyStar (.d)

.unt

Only MWD is supported, vote for other detector types.

Sciex

-

Not supported, vote

ThermoFisher

-

Not supported, vote

mzML (.mzml)

.mzml

Must be inside .mzml folder***

*It doesn’t matter if folder/file names use BIG or small or even MiXed letters.

**These are the files that help us further differentiate between vendors as folder extension often isn’t enough.

***mzML is supposed to be used only for Mass Spec, but we wanted to be able to support others too. That’s why we require a folder .mzml, and then different detector runs inside are placed into individual .mzml files.

High-throughput formats

We make a big emphasis on high-throughput techniques, and therefore we can split such files into individual wells:

Format Notes

EchoMS (aka AEMS)

Experimental support, first need to convert to .mzml, and then upload Acquisition CSV to split it. Contact us for more details: support@elsci.io

MISER

Needs a Chemstation folder, the injections had to be done with flow injection analysis (FIA) on.

RapidFire

We have a generic splitting mechanism, but haven’t tested it with RapidFire yet. Contact us: support@elsci.io